Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Ddx58Q6Q899 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx58Q6Q899 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx58Q6Q899 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 BC021767-201ENSMUST00000126387 1716 ntBASIC22.76■■□□□ 1.23
Ddx58Q6Q899 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.76■■□□□ 1.23
Ddx58Q6Q899 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Gm38285-201ENSMUST00000192928 922 ntBASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Mtag2-201ENSMUST00000058665 714 ntBASIC22.75■■□□□ 1.23
Ddx58Q6Q899 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx58Q6Q899 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx58Q6Q899 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx58Q6Q899 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx58Q6Q899 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.72■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms