Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm43799-201ENSMUST00000201845 579 ntBASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nup98Q6PFD9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nup98Q6PFD9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Gm43183-201ENSMUST00000200632 547 ntBASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Gm3375-201ENSMUST00000203929 796 ntBASIC21.86■■□□□ 1.09
Nup98Q6PFD9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
Nup98Q6PFD9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Gm13836-201ENSMUST00000121159 501 ntBASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Gm21814-202ENSMUST00000203277 873 ntBASIC21.85■■□□□ 1.09
Nup98Q6PFD9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nup98Q6PFD9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nup98Q6PFD9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nup98Q6PFD9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nup98Q6PFD9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nup98Q6PFD9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nup98Q6PFD9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nup98Q6PFD9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nup98Q6PFD9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nup98Q6PFD9 Mir2861-201ENSMUST00000175539 82 ntBASIC21.83■■□□□ 1.09
Nup98Q6PFD9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nup98Q6PFD9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.83■■□□□ 1.09
Nup98Q6PFD9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Nup98Q6PFD9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.83■■□□□ 1.08
Nup98Q6PFD9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Nup98Q6PFD9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nup98Q6PFD9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.83■■□□□ 1.08
Nup98Q6PFD9 Gm5417-201ENSMUST00000079706 384 ntBASIC21.83■■□□□ 1.08
Nup98Q6PFD9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nup98Q6PFD9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.83■■□□□ 1.08
Nup98Q6PFD9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Nup98Q6PFD9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nup98Q6PFD9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nup98Q6PFD9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nup98Q6PFD9 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.81■■□□□ 1.08
Nup98Q6PFD9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nup98Q6PFD9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nup98Q6PFD9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nup98Q6PFD9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Nup98Q6PFD9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nup98Q6PFD9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nup98Q6PFD9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.8■■□□□ 1.08
Nup98Q6PFD9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nup98Q6PFD9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms