Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prrt3Q6PE13 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Mir7071-201ENSMUST00000184847 69 ntBASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrt3Q6PE13 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Golph3-205ENSMUST00000228671 2842 ntBASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrt3Q6PE13 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrt3Q6PE13 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prrt3Q6PE13 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Gm18666-201ENSMUST00000190039 958 ntBASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrt3Q6PE13 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prrt3Q6PE13 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prrt3Q6PE13 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prrt3Q6PE13 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrt3Q6PE13 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prrt3Q6PE13 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms