Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcc2Q6PDG5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
Smarcc2Q6PDG5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcc2Q6PDG5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcc2Q6PDG5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.44■■□□□ 1.02
Smarcc2Q6PDG5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcc2Q6PDG5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcc2Q6PDG5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcc2Q6PDG5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcc2Q6PDG5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcc2Q6PDG5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Mir5133-201ENSMUST00000174955 77 ntBASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Gm6365-201ENSMUST00000054711 744 ntBASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcc2Q6PDG5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcc2Q6PDG5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcc2Q6PDG5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcc2Q6PDG5 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.41■■□□□ 1.02
Smarcc2Q6PDG5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcc2Q6PDG5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcc2Q6PDG5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcc2Q6PDG5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcc2Q6PDG5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcc2Q6PDG5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smarcc2Q6PDG5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smarcc2Q6PDG5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.39■■□□□ 1.02
Smarcc2Q6PDG5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcc2Q6PDG5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Gm7290-201ENSMUST00000104990 617 ntBASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Gm12918-201ENSMUST00000120234 636 ntBASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Gm15710-201ENSMUST00000121821 636 ntBASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Gm5075-201ENSMUST00000196916 622 ntBASIC21.38■■□□□ 1.01
Smarcc2Q6PDG5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms