Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
ShbQ6PD21 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ShbQ6PD21 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ShbQ6PD21 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
ShbQ6PD21 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ShbQ6PD21 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.1■□□□□ 0.81
ShbQ6PD21 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShbQ6PD21 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
ShbQ6PD21 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShbQ6PD21 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.09■□□□□ 0.81
ShbQ6PD21 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.09■□□□□ 0.81
ShbQ6PD21 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.09■□□□□ 0.81
ShbQ6PD21 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShbQ6PD21 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ShbQ6PD21 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShbQ6PD21 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShbQ6PD21 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ShbQ6PD21 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ShbQ6PD21 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ShbQ6PD21 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ShbQ6PD21 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.08■□□□□ 0.81
ShbQ6PD21 Gm28033-201ENSMUST00000184224 96 ntBASIC20.08■□□□□ 0.81
ShbQ6PD21 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ShbQ6PD21 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
ShbQ6PD21 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ShbQ6PD21 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShbQ6PD21 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShbQ6PD21 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.07■□□□□ 0.8
ShbQ6PD21 Gm27704-201ENSMUST00000185094 107 ntBASIC20.07■□□□□ 0.8
ShbQ6PD21 Gm38027-201ENSMUST00000192315 235 ntBASIC20.07■□□□□ 0.8
ShbQ6PD21 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.07■□□□□ 0.8
ShbQ6PD21 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShbQ6PD21 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShbQ6PD21 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ShbQ6PD21 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShbQ6PD21 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShbQ6PD21 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShbQ6PD21 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ShbQ6PD21 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ShbQ6PD21 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ShbQ6PD21 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ShbQ6PD21 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ShbQ6PD21 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShbQ6PD21 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.06■□□□□ 0.8
ShbQ6PD21 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShbQ6PD21 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ShbQ6PD21 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ShbQ6PD21 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShbQ6PD21 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShbQ6PD21 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
ShbQ6PD21 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShbQ6PD21 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.05■□□□□ 0.8
ShbQ6PD21 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShbQ6PD21 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ShbQ6PD21 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ShbQ6PD21 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShbQ6PD21 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ShbQ6PD21 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShbQ6PD21 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShbQ6PD21 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ShbQ6PD21 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShbQ6PD21 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShbQ6PD21 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.04■□□□□ 0.8
ShbQ6PD21 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ShbQ6PD21 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ShbQ6PD21 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ShbQ6PD21 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.03■□□□□ 0.8
ShbQ6PD21 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.03■□□□□ 0.8
ShbQ6PD21 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.03■□□□□ 0.8
ShbQ6PD21 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShbQ6PD21 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ShbQ6PD21 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ShbQ6PD21 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShbQ6PD21 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.02■□□□□ 0.8
ShbQ6PD21 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ShbQ6PD21 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShbQ6PD21 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShbQ6PD21 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.02■□□□□ 0.8
ShbQ6PD21 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShbQ6PD21 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ShbQ6PD21 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
ShbQ6PD21 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ShbQ6PD21 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ShbQ6PD21 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShbQ6PD21 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ShbQ6PD21 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.01■□□□□ 0.79
ShbQ6PD21 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShbQ6PD21 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShbQ6PD21 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShbQ6PD21 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShbQ6PD21 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ShbQ6PD21 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms