Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abcf1Q6P542 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.56■□□□□ 0.88
Abcf1Q6P542 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.56■□□□□ 0.88
Abcf1Q6P542 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.56■□□□□ 0.88
Abcf1Q6P542 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abcf1Q6P542 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abcf1Q6P542 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Abcf1Q6P542 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abcf1Q6P542 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abcf1Q6P542 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Abcf1Q6P542 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Abcf1Q6P542 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abcf1Q6P542 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abcf1Q6P542 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Abcf1Q6P542 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.52■□□□□ 0.88
Abcf1Q6P542 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Gm27801-201ENSMUST00000184174 223 ntBASIC20.52■□□□□ 0.88
Abcf1Q6P542 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abcf1Q6P542 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Abcf1Q6P542 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.52■□□□□ 0.87
Abcf1Q6P542 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Abcf1Q6P542 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abcf1Q6P542 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abcf1Q6P542 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Abcf1Q6P542 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.5■□□□□ 0.87
Abcf1Q6P542 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.5■□□□□ 0.87
Abcf1Q6P542 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Abcf1Q6P542 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms