Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Snrnp200Q6P4T2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snrnp200Q6P4T2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp200Q6P4T2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.42■□□□□ 0.38
Snrnp200Q6P4T2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.42■□□□□ 0.38
Snrnp200Q6P4T2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp200Q6P4T2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Snrnp200Q6P4T2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snrnp200Q6P4T2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.42■□□□□ 0.38
Snrnp200Q6P4T2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.42■□□□□ 0.38
Snrnp200Q6P4T2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.41■□□□□ 0.38
Snrnp200Q6P4T2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Gm2559-201ENSMUST00000201323 363 ntBASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.4■□□□□ 0.38
Snrnp200Q6P4T2 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.39■□□□□ 0.38
Snrnp200Q6P4T2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Snrnp200Q6P4T2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp200Q6P4T2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Snrnp200Q6P4T2 Gm5643-201ENSMUST00000117081 966 ntBASIC17.39■□□□□ 0.37
Snrnp200Q6P4T2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp200Q6P4T2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp200Q6P4T2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp200Q6P4T2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snrnp200Q6P4T2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Snrnp200Q6P4T2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.37■□□□□ 0.37
Snrnp200Q6P4T2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp200Q6P4T2 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.37■□□□□ 0.37
Snrnp200Q6P4T2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.37■□□□□ 0.37
Snrnp200Q6P4T2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Snrnp200Q6P4T2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp200Q6P4T2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp200Q6P4T2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snrnp200Q6P4T2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Zfp783-201ENSMUST00000095946 670 ntBASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Gm13168-201ENSMUST00000121771 632 ntBASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snrnp200Q6P4T2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp200Q6P4T2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snrnp200Q6P4T2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.35■□□□□ 0.37
Snrnp200Q6P4T2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Snrnp200Q6P4T2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms