Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.69■□□□□ 0.42
Scube1Q6NZL8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scube1Q6NZL8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scube1Q6NZL8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scube1Q6NZL8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Gm43530-201ENSMUST00000195920 274 ntBASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.66■□□□□ 0.42
Scube1Q6NZL8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Gm43137-201ENSMUST00000198052 594 ntBASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scube1Q6NZL8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.64■□□□□ 0.41
Scube1Q6NZL8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube1Q6NZL8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube1Q6NZL8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube1Q6NZL8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scube1Q6NZL8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scube1Q6NZL8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms