Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retreg2Q6NS82 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Gm7860-201ENSMUST00000121190 879 ntBASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retreg2Q6NS82 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Gm12441-201ENSMUST00000121806 588 ntBASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Gm10653-202ENSMUST00000139570 835 ntBASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.72■□□□□ 0.75
Retreg2Q6NS82 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Gm5408-201ENSMUST00000197998 747 ntBASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retreg2Q6NS82 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Gm13534-201ENSMUST00000121169 513 ntBASIC19.7■□□□□ 0.74
Retreg2Q6NS82 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.7■□□□□ 0.74
Retreg2Q6NS82 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg2Q6NS82 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg2Q6NS82 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg2Q6NS82 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retreg2Q6NS82 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.69■□□□□ 0.74
Retreg2Q6NS82 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms