Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhga7Q6DD96 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhga7Q6DD96 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga7Q6DD96 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga7Q6DD96 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga7Q6DD96 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhga7Q6DD96 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga7Q6DD96 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Pcdhga7Q6DD96 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdhga7Q6DD96 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga7Q6DD96 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga7Q6DD96 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga7Q6DD96 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Gm13146-201ENSMUST00000118508 780 ntBASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms