Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cep290Q6A078 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cep290Q6A078 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cep290Q6A078 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.88■□□□□ 0.61
Cep290Q6A078 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cep290Q6A078 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cep290Q6A078 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cep290Q6A078 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cep290Q6A078 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cep290Q6A078 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cep290Q6A078 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cep290Q6A078 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cep290Q6A078 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cep290Q6A078 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cep290Q6A078 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.88■□□□□ 0.61
Cep290Q6A078 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.88■□□□□ 0.61
Cep290Q6A078 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.87■□□□□ 0.61
Cep290Q6A078 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.87■□□□□ 0.61
Cep290Q6A078 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cep290Q6A078 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cep290Q6A078 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cep290Q6A078 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Cep290Q6A078 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cep290Q6A078 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cep290Q6A078 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.86■□□□□ 0.61
Cep290Q6A078 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cep290Q6A078 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cep290Q6A078 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cep290Q6A078 Gm38027-201ENSMUST00000192315 235 ntBASIC18.85■□□□□ 0.61
Cep290Q6A078 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.85■□□□□ 0.61
Cep290Q6A078 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cep290Q6A078 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cep290Q6A078 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cep290Q6A078 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cep290Q6A078 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cep290Q6A078 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.85■□□□□ 0.61
Cep290Q6A078 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cep290Q6A078 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cep290Q6A078 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cep290Q6A078 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cep290Q6A078 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Cep290Q6A078 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cep290Q6A078 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.84■□□□□ 0.61
Cep290Q6A078 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.84■□□□□ 0.61
Cep290Q6A078 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cep290Q6A078 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cep290Q6A078 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cep290Q6A078 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Cep290Q6A078 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.84■□□□□ 0.61
Cep290Q6A078 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cep290Q6A078 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cep290Q6A078 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cep290Q6A078 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.83■□□□□ 0.61
Cep290Q6A078 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cep290Q6A078 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cep290Q6A078 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cep290Q6A078 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cep290Q6A078 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cep290Q6A078 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cep290Q6A078 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cep290Q6A078 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.83■□□□□ 0.61
Cep290Q6A078 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.83■□□□□ 0.6
Cep290Q6A078 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.83■□□□□ 0.6
Cep290Q6A078 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.83■□□□□ 0.6
Cep290Q6A078 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.83■□□□□ 0.6
Cep290Q6A078 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cep290Q6A078 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cep290Q6A078 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cep290Q6A078 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cep290Q6A078 Gm9013-201ENSMUST00000132939 882 ntBASIC18.82■□□□□ 0.6
Cep290Q6A078 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cep290Q6A078 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.82■□□□□ 0.6
Cep290Q6A078 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cep290Q6A078 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cep290Q6A078 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cep290Q6A078 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cep290Q6A078 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cep290Q6A078 Mir5130-201ENSMUST00000175160 84 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms