Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Tgds-204ENSMUST00000228543 1594 ntBASIC18.93■□□□□ 0.62
Six1Q62231 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Six1Q62231 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Six1Q62231 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.92■□□□□ 0.62
Six1Q62231 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.92■□□□□ 0.62
Six1Q62231 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.92■□□□□ 0.62
Six1Q62231 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six1Q62231 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.91■□□□□ 0.62
Six1Q62231 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Gm9988-201ENSMUST00000069786 435 ntBASIC18.91■□□□□ 0.62
Six1Q62231 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Six1Q62231 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Six1Q62231 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six1Q62231 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.91■□□□□ 0.62
Six1Q62231 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six1Q62231 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.9■□□□□ 0.62
Six1Q62231 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six1Q62231 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six1Q62231 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six1Q62231 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Six1Q62231 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six1Q62231 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six1Q62231 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Six1Q62231 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.9■□□□□ 0.62
Six1Q62231 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six1Q62231 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six1Q62231 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Six1Q62231 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Six1Q62231 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Six1Q62231 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six1Q62231 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six1Q62231 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Six1Q62231 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six1Q62231 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six1Q62231 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Six1Q62231 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Six1Q62231 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six1Q62231 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six1Q62231 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Six1Q62231 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six1Q62231 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six1Q62231 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six1Q62231 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six1Q62231 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six1Q62231 Gm15039-201ENSMUST00000118914 875 ntBASIC18.88■□□□□ 0.61
Six1Q62231 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Six1Q62231 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Six1Q62231 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six1Q62231 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.87■□□□□ 0.61
Six1Q62231 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.87■□□□□ 0.61
Six1Q62231 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Six1Q62231 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.87■□□□□ 0.61
Six1Q62231 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Six1Q62231 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Six1Q62231 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.87■□□□□ 0.61
Six1Q62231 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Six1Q62231 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.87■□□□□ 0.61
Six1Q62231 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six1Q62231 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Six1Q62231 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.86■□□□□ 0.61
Six1Q62231 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.86■□□□□ 0.61
Six1Q62231 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.86■□□□□ 0.61
Six1Q62231 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six1Q62231 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Six1Q62231 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Six1Q62231 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 229.7 ms