Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.41■□□□□ 0.38
VcanQ62059 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VcanQ62059 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VcanQ62059 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VcanQ62059 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
VcanQ62059 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.4■□□□□ 0.38
VcanQ62059 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.4■□□□□ 0.38
VcanQ62059 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VcanQ62059 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.4■□□□□ 0.38
VcanQ62059 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VcanQ62059 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VcanQ62059 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VcanQ62059 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VcanQ62059 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VcanQ62059 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.39■□□□□ 0.37
VcanQ62059 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.39■□□□□ 0.37
VcanQ62059 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
VcanQ62059 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VcanQ62059 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.39■□□□□ 0.37
VcanQ62059 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VcanQ62059 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VcanQ62059 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VcanQ62059 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VcanQ62059 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VcanQ62059 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VcanQ62059 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
VcanQ62059 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VcanQ62059 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VcanQ62059 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.38■□□□□ 0.37
VcanQ62059 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.38■□□□□ 0.37
VcanQ62059 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VcanQ62059 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VcanQ62059 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VcanQ62059 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VcanQ62059 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VcanQ62059 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.37■□□□□ 0.37
VcanQ62059 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.37■□□□□ 0.37
VcanQ62059 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.37■□□□□ 0.37
VcanQ62059 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.37■□□□□ 0.37
VcanQ62059 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VcanQ62059 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VcanQ62059 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Gm18025-201ENSMUST00000221733 862 ntBASIC17.37■□□□□ 0.37
VcanQ62059 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VcanQ62059 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.36■□□□□ 0.37
VcanQ62059 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.36■□□□□ 0.37
VcanQ62059 Gm27525-201ENSMUST00000184465 107 ntBASIC17.36■□□□□ 0.37
VcanQ62059 Gm7063-201ENSMUST00000186840 981 ntBASIC17.36■□□□□ 0.37
VcanQ62059 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VcanQ62059 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 Gm27704-201ENSMUST00000185094 107 ntBASIC17.36■□□□□ 0.37
VcanQ62059 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.36■□□□□ 0.37
VcanQ62059 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VcanQ62059 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VcanQ62059 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.36■□□□□ 0.37
VcanQ62059 Mzt1-203ENSMUST00000227948 952 ntBASIC17.36■□□□□ 0.37
VcanQ62059 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VcanQ62059 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VcanQ62059 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VcanQ62059 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VcanQ62059 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VcanQ62059 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VcanQ62059 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VcanQ62059 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
VcanQ62059 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VcanQ62059 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VcanQ62059 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VcanQ62059 Gm18115-201ENSMUST00000221209 621 ntBASIC17.34■□□□□ 0.37
VcanQ62059 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VcanQ62059 Mtag2-201ENSMUST00000058665 714 ntBASIC17.34■□□□□ 0.37
VcanQ62059 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.34■□□□□ 0.37
VcanQ62059 Gm24589-201ENSMUST00000116692 94 ntBASIC17.34■□□□□ 0.37
VcanQ62059 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms