Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox17Q61473 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox17Q61473 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sox17Q61473 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sox17Q61473 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.24■□□□□ 0.35
Sox17Q61473 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sox17Q61473 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Sox17Q61473 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox17Q61473 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.23■□□□□ 0.35
Sox17Q61473 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.23■□□□□ 0.35
Sox17Q61473 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sox17Q61473 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sox17Q61473 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Gm7860-201ENSMUST00000121190 879 ntBASIC17.23■□□□□ 0.35
Sox17Q61473 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.23■□□□□ 0.35
Sox17Q61473 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox17Q61473 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.23■□□□□ 0.35
Sox17Q61473 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Sox17Q61473 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.22■□□□□ 0.35
Sox17Q61473 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.22■□□□□ 0.35
Sox17Q61473 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox17Q61473 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.22■□□□□ 0.35
Sox17Q61473 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sox17Q61473 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.21■□□□□ 0.35
Sox17Q61473 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.21■□□□□ 0.35
Sox17Q61473 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Sox17Q61473 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.21■□□□□ 0.35
Sox17Q61473 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.21■□□□□ 0.35
Sox17Q61473 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox17Q61473 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Sox17Q61473 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.2■□□□□ 0.34
Sox17Q61473 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.2■□□□□ 0.34
Sox17Q61473 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sox17Q61473 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sox17Q61473 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Sox17Q61473 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Sox17Q61473 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.2■□□□□ 0.34
Sox17Q61473 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox17Q61473 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Sox17Q61473 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sox17Q61473 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox17Q61473 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox17Q61473 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox17Q61473 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox17Q61473 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms