Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ccne1Q61457 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ccne1Q61457 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ccne1Q61457 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ccne1Q61457 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ccne1Q61457 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC24.05■■□□□ 1.44
Ccne1Q61457 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ccne1Q61457 Gm10138-203ENSMUST00000206952 366 ntBASIC24.05■■□□□ 1.44
Ccne1Q61457 Gm5417-201ENSMUST00000079706 384 ntBASIC24.05■■□□□ 1.44
Ccne1Q61457 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ccne1Q61457 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC24.05■■□□□ 1.44
Ccne1Q61457 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ccne1Q61457 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccne1Q61457 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ccne1Q61457 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Ccne1Q61457 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC24.04■■□□□ 1.44
Ccne1Q61457 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Ccne1Q61457 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccne1Q61457 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
Ccne1Q61457 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Ccne1Q61457 Gm9987-201ENSMUST00000069768 567 ntBASIC24.04■■□□□ 1.44
Ccne1Q61457 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccne1Q61457 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ccne1Q61457 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccne1Q61457 Gm45560-201ENSMUST00000211492 1472 ntBASIC24.04■■□□□ 1.44
Ccne1Q61457 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ccne1Q61457 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccne1Q61457 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ccne1Q61457 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ccne1Q61457 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC24.03■■□□□ 1.44
Ccne1Q61457 Gm38285-201ENSMUST00000192928 922 ntBASIC24.03■■□□□ 1.44
Ccne1Q61457 Gm18025-201ENSMUST00000221733 862 ntBASIC24.03■■□□□ 1.44
Ccne1Q61457 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ccne1Q61457 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ccne1Q61457 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ccne1Q61457 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ccne1Q61457 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC24.02■■□□□ 1.44
Ccne1Q61457 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccne1Q61457 Gm42545-201ENSMUST00000202755 922 ntBASIC24.02■■□□□ 1.44
Ccne1Q61457 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccne1Q61457 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccne1Q61457 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC24.02■■□□□ 1.44
Ccne1Q61457 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ccne1Q61457 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccne1Q61457 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ccne1Q61457 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccne1Q61457 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccne1Q61457 Gm15375-201ENSMUST00000119510 849 ntBASIC24.01■■□□□ 1.43
Ccne1Q61457 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccne1Q61457 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccne1Q61457 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Ccne1Q61457 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccne1Q61457 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ccne1Q61457 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccne1Q61457 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Ccne1Q61457 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ccne1Q61457 Gm11643-201ENSMUST00000119578 864 ntBASIC24■■□□□ 1.43
Ccne1Q61457 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC24■■□□□ 1.43
Ccne1Q61457 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ccne1Q61457 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24■■□□□ 1.43
Ccne1Q61457 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC24■■□□□ 1.43
Ccne1Q61457 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ccne1Q61457 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ccne1Q61457 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ccne1Q61457 Gm37805-201ENSMUST00000192612 1094 ntBASIC23.99■■□□□ 1.43
Ccne1Q61457 Gm43799-201ENSMUST00000201845 579 ntBASIC23.99■■□□□ 1.43
Ccne1Q61457 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ccne1Q61457 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ccne1Q61457 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ccne1Q61457 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ccne1Q61457 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Ccne1Q61457 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ccne1Q61457 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ccne1Q61457 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
Ccne1Q61457 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC23.98■■□□□ 1.43
Ccne1Q61457 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ccne1Q61457 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ccne1Q61457 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC23.98■■□□□ 1.43
Ccne1Q61457 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.97■■□□□ 1.43
Ccne1Q61457 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ccne1Q61457 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ccne1Q61457 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ccne1Q61457 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC23.97■■□□□ 1.43
Ccne1Q61457 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC23.97■■□□□ 1.43
Ccne1Q61457 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.97■■□□□ 1.43
Ccne1Q61457 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Ccne1Q61457 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccne1Q61457 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccne1Q61457 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccne1Q61457 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23.96■■□□□ 1.43
Ccne1Q61457 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ccne1Q61457 Gm37292-201ENSMUST00000192062 758 ntBASIC23.96■■□□□ 1.43
Ccne1Q61457 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.96■■□□□ 1.43
Ccne1Q61457 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccne1Q61457 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Ccne1Q61457 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Ccne1Q61457 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Ccne1Q61457 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccne1Q61457 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccne1Q61457 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms