Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six4Q61321 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.6■□□□□ 0.57
Six4Q61321 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Six4Q61321 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.6■□□□□ 0.57
Six4Q61321 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six4Q61321 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Six4Q61321 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.59■□□□□ 0.57
Six4Q61321 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six4Q61321 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Six4Q61321 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six4Q61321 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.58■□□□□ 0.57
Six4Q61321 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Six4Q61321 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six4Q61321 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six4Q61321 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Six4Q61321 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.58■□□□□ 0.56
Six4Q61321 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six4Q61321 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six4Q61321 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six4Q61321 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six4Q61321 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Six4Q61321 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Six4Q61321 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.57■□□□□ 0.56
Six4Q61321 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.57■□□□□ 0.56
Six4Q61321 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Six4Q61321 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Six4Q61321 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Six4Q61321 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six4Q61321 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.56■□□□□ 0.56
Six4Q61321 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.56■□□□□ 0.56
Six4Q61321 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six4Q61321 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six4Q61321 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.56■□□□□ 0.56
Six4Q61321 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six4Q61321 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six4Q61321 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.56■□□□□ 0.56
Six4Q61321 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six4Q61321 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six4Q61321 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Six4Q61321 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Six4Q61321 Gm5408-201ENSMUST00000197998 747 ntBASIC18.55■□□□□ 0.56
Six4Q61321 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Six4Q61321 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.55■□□□□ 0.56
Six4Q61321 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.55■□□□□ 0.56
Six4Q61321 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six4Q61321 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six4Q61321 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six4Q61321 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six4Q61321 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six4Q61321 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six4Q61321 Gm22325-201ENSMUST00000158904 308 ntBASIC18.54■□□□□ 0.56
Six4Q61321 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Six4Q61321 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six4Q61321 Rab3c-203ENSMUST00000224180 967 ntBASIC18.54■□□□□ 0.56
Six4Q61321 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.54■□□□□ 0.56
Six4Q61321 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six4Q61321 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six4Q61321 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six4Q61321 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
Six4Q61321 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Six4Q61321 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Six4Q61321 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Six4Q61321 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six4Q61321 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.52■□□□□ 0.56
Six4Q61321 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms