Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1eQ61290 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1eQ61290 Gm43183-201ENSMUST00000200632 547 ntBASIC18.18■□□□□ 0.5
Cacna1eQ61290 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1eQ61290 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Gm10138-203ENSMUST00000206952 366 ntBASIC18.17■□□□□ 0.5
Cacna1eQ61290 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1eQ61290 Gm12382-201ENSMUST00000122005 922 ntBASIC18.16■□□□□ 0.5
Cacna1eQ61290 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1eQ61290 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1eQ61290 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cacna1eQ61290 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1eQ61290 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1eQ61290 Odf3b-204ENSMUST00000227834 930 ntBASIC18.16■□□□□ 0.5
Cacna1eQ61290 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.15■□□□□ 0.5
Cacna1eQ61290 Gm3375-201ENSMUST00000203929 796 ntBASIC18.15■□□□□ 0.5
Cacna1eQ61290 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1eQ61290 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1eQ61290 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.15■□□□□ 0.5
Cacna1eQ61290 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1eQ61290 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Cacna1eQ61290 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1eQ61290 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cacna1eQ61290 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cacna1eQ61290 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1eQ61290 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.14■□□□□ 0.49
Cacna1eQ61290 Mir6349-201ENSMUST00000184059 97 ntBASIC18.14■□□□□ 0.49
Cacna1eQ61290 Gm7889-201ENSMUST00000185591 958 ntBASIC18.14■□□□□ 0.49
Cacna1eQ61290 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1eQ61290 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1eQ61290 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1eQ61290 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1eQ61290 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1eQ61290 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1eQ61290 Gm37292-201ENSMUST00000192062 758 ntBASIC18.14■□□□□ 0.49
Cacna1eQ61290 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cacna1eQ61290 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.12■□□□□ 0.49
Cacna1eQ61290 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.12■□□□□ 0.49
Cacna1eQ61290 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1eQ61290 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1eQ61290 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.11■□□□□ 0.49
Cacna1eQ61290 Gm11539-201ENSMUST00000119837 557 ntBASIC18.11■□□□□ 0.49
Cacna1eQ61290 Gm13436-201ENSMUST00000120418 567 ntBASIC18.11■□□□□ 0.49
Cacna1eQ61290 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.11■□□□□ 0.49
Cacna1eQ61290 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.11■□□□□ 0.49
Cacna1eQ61290 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacna1eQ61290 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1eQ61290 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacna1eQ61290 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.11■□□□□ 0.49
Cacna1eQ61290 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1eQ61290 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cacna1eQ61290 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1eQ61290 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cacna1eQ61290 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Gm38285-201ENSMUST00000192928 922 ntBASIC18.1■□□□□ 0.49
Cacna1eQ61290 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1eQ61290 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms