Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.3■□□□□ 0.84
Cln3Q61124 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.3■□□□□ 0.84
Cln3Q61124 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cln3Q61124 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.3■□□□□ 0.84
Cln3Q61124 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cln3Q61124 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cln3Q61124 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cln3Q61124 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.29■□□□□ 0.84
Cln3Q61124 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cln3Q61124 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.28■□□□□ 0.84
Cln3Q61124 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cln3Q61124 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.28■□□□□ 0.84
Cln3Q61124 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cln3Q61124 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.28■□□□□ 0.84
Cln3Q61124 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.28■□□□□ 0.84
Cln3Q61124 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.28■□□□□ 0.84
Cln3Q61124 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cln3Q61124 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cln3Q61124 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cln3Q61124 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cln3Q61124 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cln3Q61124 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.27■□□□□ 0.84
Cln3Q61124 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cln3Q61124 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cln3Q61124 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.27■□□□□ 0.84
Cln3Q61124 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cln3Q61124 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cln3Q61124 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cln3Q61124 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Cln3Q61124 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cln3Q61124 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cln3Q61124 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln3Q61124 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln3Q61124 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln3Q61124 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln3Q61124 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cln3Q61124 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cln3Q61124 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.26■□□□□ 0.83
Cln3Q61124 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Cln3Q61124 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.26■□□□□ 0.83
Cln3Q61124 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cln3Q61124 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cln3Q61124 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cln3Q61124 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Cln3Q61124 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.25■□□□□ 0.83
Cln3Q61124 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cln3Q61124 Gm30025-201ENSMUST00000218555 728 ntBASIC20.25■□□□□ 0.83
Cln3Q61124 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cln3Q61124 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cln3Q61124 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cln3Q61124 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.24■□□□□ 0.83
Cln3Q61124 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.24■□□□□ 0.83
Cln3Q61124 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.24■□□□□ 0.83
Cln3Q61124 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cln3Q61124 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.23■□□□□ 0.83
Cln3Q61124 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Cln3Q61124 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cln3Q61124 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cln3Q61124 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cln3Q61124 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cln3Q61124 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms