Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdf4Q61112 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdf4Q61112 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdf4Q61112 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sdf4Q61112 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdf4Q61112 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.68■□□□□ 0.58
Sdf4Q61112 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdf4Q61112 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdf4Q61112 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdf4Q61112 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdf4Q61112 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.67■□□□□ 0.58
Sdf4Q61112 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Sdf4Q61112 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sdf4Q61112 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sdf4Q61112 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Golph3-205ENSMUST00000228671 2842 ntBASIC18.67■□□□□ 0.58
Sdf4Q61112 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdf4Q61112 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdf4Q61112 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdf4Q61112 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdf4Q61112 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdf4Q61112 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdf4Q61112 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.66■□□□□ 0.58
Sdf4Q61112 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.66■□□□□ 0.58
Sdf4Q61112 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sdf4Q61112 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sdf4Q61112 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdf4Q61112 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdf4Q61112 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.66■□□□□ 0.58
Sdf4Q61112 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sdf4Q61112 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sdf4Q61112 Gm7291-201ENSMUST00000199147 382 ntBASIC18.65■□□□□ 0.58
Sdf4Q61112 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.65■□□□□ 0.58
Sdf4Q61112 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.65■□□□□ 0.58
Sdf4Q61112 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdf4Q61112 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sdf4Q61112 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.65■□□□□ 0.58
Sdf4Q61112 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.64■□□□□ 0.58
Sdf4Q61112 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sdf4Q61112 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Gm7290-201ENSMUST00000104990 617 ntBASIC18.64■□□□□ 0.57
Sdf4Q61112 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Gm12918-201ENSMUST00000120234 636 ntBASIC18.64■□□□□ 0.57
Sdf4Q61112 Gm15710-201ENSMUST00000121821 636 ntBASIC18.64■□□□□ 0.57
Sdf4Q61112 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.64■□□□□ 0.57
Sdf4Q61112 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Gm5075-201ENSMUST00000196916 622 ntBASIC18.64■□□□□ 0.57
Sdf4Q61112 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.64■□□□□ 0.57
Sdf4Q61112 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.64■□□□□ 0.57
Sdf4Q61112 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sdf4Q61112 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.64■□□□□ 0.57
Sdf4Q61112 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdf4Q61112 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.63■□□□□ 0.57
Sdf4Q61112 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sdf4Q61112 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.63■□□□□ 0.57
Sdf4Q61112 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdf4Q61112 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms