Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Xrcc1Q60596 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.57■□□□□ 0.4
Xrcc1Q60596 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.57■□□□□ 0.4
Xrcc1Q60596 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Gm26524-201ENSMUST00000192339 390 ntBASIC17.57■□□□□ 0.4
Xrcc1Q60596 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.57■□□□□ 0.4
Xrcc1Q60596 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Xrcc1Q60596 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.56■□□□□ 0.4
Xrcc1Q60596 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Xrcc1Q60596 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.56■□□□□ 0.4
Xrcc1Q60596 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Xrcc1Q60596 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xrcc1Q60596 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrcc1Q60596 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrcc1Q60596 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.55■□□□□ 0.4
Xrcc1Q60596 Gm12441-201ENSMUST00000121806 588 ntBASIC17.55■□□□□ 0.4
Xrcc1Q60596 Rab3c-203ENSMUST00000224180 967 ntBASIC17.55■□□□□ 0.4
Xrcc1Q60596 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xrcc1Q60596 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Xrcc1Q60596 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.54■□□□□ 0.4
Xrcc1Q60596 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Xrcc1Q60596 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.53■□□□□ 0.4
Xrcc1Q60596 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
Xrcc1Q60596 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrcc1Q60596 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrcc1Q60596 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrcc1Q60596 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
Xrcc1Q60596 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrcc1Q60596 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Xrcc1Q60596 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrcc1Q60596 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Xrcc1Q60596 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrcc1Q60596 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms