Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 Golph3-202ENSMUST00000226517 2359 ntBASIC16.2■□□□□ 0.18
Trav6-2Q5R1I4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Gm13836-201ENSMUST00000121159 501 ntBASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-2Q5R1I4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-2Q5R1I4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-2Q5R1I4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Gm37055-201ENSMUST00000191866 133 ntBASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Zfp783-201ENSMUST00000095946 670 ntBASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav6-2Q5R1I4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav6-2Q5R1I4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Gm7977-201ENSMUST00000193787 748 ntBASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Mtag2-201ENSMUST00000058665 714 ntBASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-2Q5R1I4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms