Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav5d-4Q5R1F6 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5d-4Q5R1F6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Gm13534-201ENSMUST00000121169 513 ntBASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5d-4Q5R1F6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5d-4Q5R1F6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav5d-4Q5R1F6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav5d-4Q5R1F6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Trav5d-4Q5R1F6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5d-4Q5R1F6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5d-4Q5R1F6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav5d-4Q5R1F6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav5d-4Q5R1F6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5d-4Q5R1F6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5d-4Q5R1F6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav5d-4Q5R1F6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5d-4Q5R1F6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5d-4Q5R1F6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5d-4Q5R1F6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav5d-4Q5R1F6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5d-4Q5R1F6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms