Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Vps41Q5KU39 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps41Q5KU39 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Vps41Q5KU39 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Vps41Q5KU39 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Vps41Q5KU39 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.16■□□□□ 0.66
Vps41Q5KU39 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.16■□□□□ 0.66
Vps41Q5KU39 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vps41Q5KU39 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps41Q5KU39 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps41Q5KU39 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps41Q5KU39 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Vps41Q5KU39 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps41Q5KU39 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.15■□□□□ 0.66
Vps41Q5KU39 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps41Q5KU39 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vps41Q5KU39 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vps41Q5KU39 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vps41Q5KU39 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vps41Q5KU39 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vps41Q5KU39 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vps41Q5KU39 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Vps41Q5KU39 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vps41Q5KU39 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Vps41Q5KU39 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.13■□□□□ 0.65
Vps41Q5KU39 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps41Q5KU39 Gm27801-201ENSMUST00000184174 223 ntBASIC19.13■□□□□ 0.65
Vps41Q5KU39 Gm13241-201ENSMUST00000094493 780 ntBASIC19.13■□□□□ 0.65
Vps41Q5KU39 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps41Q5KU39 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vps41Q5KU39 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Vps41Q5KU39 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vps41Q5KU39 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.13■□□□□ 0.65
Vps41Q5KU39 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps41Q5KU39 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.12■□□□□ 0.65
Vps41Q5KU39 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Vps41Q5KU39 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.12■□□□□ 0.65
Vps41Q5KU39 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps41Q5KU39 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vps41Q5KU39 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Vps41Q5KU39 Gm8493-201ENSMUST00000196881 489 ntBASIC19.12■□□□□ 0.65
Vps41Q5KU39 Gm43173-201ENSMUST00000202246 593 ntBASIC19.12■□□□□ 0.65
Vps41Q5KU39 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.12■□□□□ 0.65
Vps41Q5KU39 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps41Q5KU39 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vps41Q5KU39 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms