Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps13aQ5H8C4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps13aQ5H8C4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Flg-201ENSMUST00000050758 1488 ntBASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps13aQ5H8C4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps13aQ5H8C4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps13aQ5H8C4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps13aQ5H8C4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Vps13aQ5H8C4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps13aQ5H8C4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps13aQ5H8C4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.36■□□□□ 0.53
Vps13aQ5H8C4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 AW822252-206ENSMUST00000208904 237 ntBASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps13aQ5H8C4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps13aQ5H8C4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps13aQ5H8C4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.33■□□□□ 0.53
Vps13aQ5H8C4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps13aQ5H8C4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps13aQ5H8C4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps13aQ5H8C4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps13aQ5H8C4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Gm17807-201ENSMUST00000186869 298 ntBASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps13aQ5H8C4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms