Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Bdp1Q571C7 Mir3081-201ENSMUST00000175305 84 ntBASIC18.79■□□□□ 0.6
Bdp1Q571C7 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.79■□□□□ 0.6
Bdp1Q571C7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Bdp1Q571C7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Bdp1Q571C7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.79■□□□□ 0.6
Bdp1Q571C7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.78■□□□□ 0.6
Bdp1Q571C7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Bdp1Q571C7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Bdp1Q571C7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bdp1Q571C7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.77■□□□□ 0.6
Bdp1Q571C7 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.77■□□□□ 0.6
Bdp1Q571C7 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.77■□□□□ 0.6
Bdp1Q571C7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Bdp1Q571C7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.77■□□□□ 0.6
Bdp1Q571C7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Bdp1Q571C7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bdp1Q571C7 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.77■□□□□ 0.6
Bdp1Q571C7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bdp1Q571C7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Bdp1Q571C7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Bdp1Q571C7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bdp1Q571C7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bdp1Q571C7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bdp1Q571C7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bdp1Q571C7 Gm27459-201ENSMUST00000184860 107 ntBASIC18.76■□□□□ 0.59
Bdp1Q571C7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bdp1Q571C7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bdp1Q571C7 Mir8098-201ENSMUST00000184011 137 ntBASIC18.76■□□□□ 0.59
Bdp1Q571C7 Gm5864-201ENSMUST00000202263 970 ntBASIC18.76■□□□□ 0.59
Bdp1Q571C7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.76■□□□□ 0.59
Bdp1Q571C7 Gm21559-201ENSMUST00000220638 855 ntBASIC18.76■□□□□ 0.59
Bdp1Q571C7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bdp1Q571C7 Gm8587-201ENSMUST00000076538 843 ntBASIC18.76■□□□□ 0.59
Bdp1Q571C7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Bdp1Q571C7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Bdp1Q571C7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Bdp1Q571C7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Gm17808-201ENSMUST00000200859 894 ntBASIC18.74■□□□□ 0.59
Bdp1Q571C7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.74■□□□□ 0.59
Bdp1Q571C7 Birc2-201ENSMUST00000054878 378 ntBASIC18.74■□□□□ 0.59
Bdp1Q571C7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Bdp1Q571C7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Bdp1Q571C7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Bdp1Q571C7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.72■□□□□ 0.59
Bdp1Q571C7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Bdp1Q571C7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Bdp1Q571C7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Bdp1Q571C7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Bdp1Q571C7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Bdp1Q571C7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Bdp1Q571C7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.71■□□□□ 0.59
Bdp1Q571C7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.71■□□□□ 0.59
Bdp1Q571C7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Bdp1Q571C7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.71■□□□□ 0.59
Bdp1Q571C7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms