Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rc3h1Q4VGL6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Gm10698-201ENSMUST00000182663 604 ntBASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rc3h1Q4VGL6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Mtag2-201ENSMUST00000058665 714 ntBASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rc3h1Q4VGL6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rc3h1Q4VGL6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.27■□□□□ 0.99
Rc3h1Q4VGL6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rc3h1Q4VGL6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rc3h1Q4VGL6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rc3h1Q4VGL6 Flg-201ENSMUST00000050758 1488 ntBASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.26■□□□□ 0.99
Rc3h1Q4VGL6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rc3h1Q4VGL6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rc3h1Q4VGL6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
Rc3h1Q4VGL6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms