Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Gm8587-201ENSMUST00000076538 843 ntBASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Pds5bQ4VA53 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Pds5bQ4VA53 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
Pds5bQ4VA53 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Pds5bQ4VA53 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.78
Pds5bQ4VA53 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC32.44■■■□□ 2.78
Pds5bQ4VA53 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Pds5bQ4VA53 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Gm6443-201ENSMUST00000203599 874 ntBASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Gm18115-201ENSMUST00000221209 621 ntBASIC32.43■■■□□ 2.78
Pds5bQ4VA53 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Pds5bQ4VA53 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Pds5bQ4VA53 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Pds5bQ4VA53 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Pds5bQ4VA53 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
Pds5bQ4VA53 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pds5bQ4VA53 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pds5bQ4VA53 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pds5bQ4VA53 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pds5bQ4VA53 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Pds5bQ4VA53 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC32.4■■■□□ 2.78
Pds5bQ4VA53 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Pds5bQ4VA53 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Pds5bQ4VA53 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Pds5bQ4VA53 Gm24589-201ENSMUST00000116692 94 ntBASIC32.39■■■□□ 2.78
Pds5bQ4VA53 AW822252-206ENSMUST00000208904 237 ntBASIC32.39■■■□□ 2.78
Pds5bQ4VA53 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Pds5bQ4VA53 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pds5bQ4VA53 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pds5bQ4VA53 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pds5bQ4VA53 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pds5bQ4VA53 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Pds5bQ4VA53 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pds5bQ4VA53 Gm13474-201ENSMUST00000122466 815 ntBASIC32.37■■■□□ 2.77
Pds5bQ4VA53 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Pds5bQ4VA53 Mir1668-201ENSMUST00000184114 107 ntBASIC32.37■■■□□ 2.77
Pds5bQ4VA53 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pds5bQ4VA53 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pds5bQ4VA53 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Pds5bQ4VA53 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC32.36■■■□□ 2.77
Pds5bQ4VA53 AC164629.2-201ENSMUST00000217916 270 ntBASIC32.36■■■□□ 2.77
Pds5bQ4VA53 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Pds5bQ4VA53 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pds5bQ4VA53 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pds5bQ4VA53 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Pds5bQ4VA53 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pds5bQ4VA53 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Pds5bQ4VA53 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Pds5bQ4VA53 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Gm7370-201ENSMUST00000219471 767 ntBASIC32.34■■■□□ 2.77
Pds5bQ4VA53 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Gm45640-201ENSMUST00000210665 1896 ntBASIC32.34■■■□□ 2.77
Pds5bQ4VA53 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Gm27389-201ENSMUST00000183622 195 ntBASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
Pds5bQ4VA53 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pds5bQ4VA53 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pds5bQ4VA53 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pds5bQ4VA53 Mir3081-201ENSMUST00000175305 84 ntBASIC32.33■■■□□ 2.77
Pds5bQ4VA53 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Pds5bQ4VA53 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pds5bQ4VA53 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
Pds5bQ4VA53 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pds5bQ4VA53 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pds5bQ4VA53 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Pds5bQ4VA53 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
Pds5bQ4VA53 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Pds5bQ4VA53 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Pds5bQ4VA53 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Pds5bQ4VA53 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Pds5bQ4VA53 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms