Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf38aQ4FK66 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf38aQ4FK66 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Zfp783-201ENSMUST00000095946 670 ntBASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf38aQ4FK66 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38aQ4FK66 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38aQ4FK66 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38aQ4FK66 Gm10698-201ENSMUST00000182663 604 ntBASIC21.47■■□□□ 1.03
Prpf38aQ4FK66 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.47■■□□□ 1.03
Prpf38aQ4FK66 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38aQ4FK66 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Prpf38aQ4FK66 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf38aQ4FK66 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf38aQ4FK66 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Prpf38aQ4FK66 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Gm15378-201ENSMUST00000121894 207 ntBASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf38aQ4FK66 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.44■■□□□ 1.02
Prpf38aQ4FK66 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38aQ4FK66 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38aQ4FK66 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38aQ4FK66 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.44■■□□□ 1.02
Prpf38aQ4FK66 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38aQ4FK66 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf38aQ4FK66 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 BC021767-201ENSMUST00000126387 1716 ntBASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf38aQ4FK66 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Mtag2-201ENSMUST00000058665 714 ntBASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf38aQ4FK66 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prpf38aQ4FK66 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms