Protein–RNA interactions for Protein: Q3UWQ3

Ube2fb, NEDD8-conjugating enzyme UBE2F-B, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fbQ3UWQ3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube2fbQ3UWQ3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.14■□□□□ 0.33
Ube2fbQ3UWQ3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube2fbQ3UWQ3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ube2fbQ3UWQ3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ube2fbQ3UWQ3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube2fbQ3UWQ3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube2fbQ3UWQ3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube2fbQ3UWQ3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube2fbQ3UWQ3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube2fbQ3UWQ3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Gm27275-201ENSMUST00000184318 272 ntBASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ube2fbQ3UWQ3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube2fbQ3UWQ3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube2fbQ3UWQ3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.08■□□□□ 0.33
Ube2fbQ3UWQ3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ube2fbQ3UWQ3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Ube2fbQ3UWQ3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube2fbQ3UWQ3 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.08■□□□□ 0.32
Ube2fbQ3UWQ3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ube2fbQ3UWQ3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube2fbQ3UWQ3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ube2fbQ3UWQ3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms