Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smu1Q3UKJ7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smu1Q3UKJ7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smu1Q3UKJ7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.63■□□□□ 0.41
Smu1Q3UKJ7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smu1Q3UKJ7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smu1Q3UKJ7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms