Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnrc6aQ3UHK8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.1■□□□□ 0.33
Tnrc6aQ3UHK8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnrc6aQ3UHK8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnrc6aQ3UHK8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnrc6aQ3UHK8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnrc6aQ3UHK8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnrc6aQ3UHK8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tnrc6aQ3UHK8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnrc6aQ3UHK8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnrc6aQ3UHK8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnrc6aQ3UHK8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnrc6aQ3UHK8 Gm18025-201ENSMUST00000221733 862 ntBASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Flg-201ENSMUST00000050758 1488 ntBASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tnrc6aQ3UHK8 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Gm21814-202ENSMUST00000203277 873 ntBASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 BC021767-201ENSMUST00000126387 1716 ntBASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnrc6aQ3UHK8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnrc6aQ3UHK8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms