Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snx27Q3UHD6 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Zfp783-201ENSMUST00000095946 670 ntBASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snx27Q3UHD6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 BC021767-201ENSMUST00000126387 1716 ntBASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snx27Q3UHD6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snx27Q3UHD6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Mtag2-201ENSMUST00000058665 714 ntBASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snx27Q3UHD6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx27Q3UHD6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx27Q3UHD6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.87■□□□□ 0.77
Snx27Q3UHD6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx27Q3UHD6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Snx27Q3UHD6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.87■□□□□ 0.77
Snx27Q3UHD6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snx27Q3UHD6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Snx27Q3UHD6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Gm15378-201ENSMUST00000121894 207 ntBASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snx27Q3UHD6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Gm38285-201ENSMUST00000192928 922 ntBASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snx27Q3UHD6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snx27Q3UHD6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snx27Q3UHD6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms