Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Gm16061-201ENSMUST00000122167 857 ntBASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Spg11Q3UHA3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Spg11Q3UHA3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Spg11Q3UHA3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Spg11Q3UHA3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Spg11Q3UHA3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Spg11Q3UHA3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Spg11Q3UHA3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17■□□□□ 0.31
Spg11Q3UHA3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Spg11Q3UHA3 Gm10654-201ENSMUST00000098653 1633 ntBASIC17■□□□□ 0.31
Spg11Q3UHA3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Spg11Q3UHA3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms