Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim7Q3TJD7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Gm42545-201ENSMUST00000202755 922 ntBASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Gm3375-201ENSMUST00000203929 796 ntBASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Zfp783-201ENSMUST00000095946 670 ntBASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim7Q3TJD7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdlim7Q3TJD7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pdlim7Q3TJD7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.76■□□□□ 0.91
Pdlim7Q3TJD7 Gm10138-203ENSMUST00000206952 366 ntBASIC20.76■□□□□ 0.91
Pdlim7Q3TJD7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Pdlim7Q3TJD7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.75■□□□□ 0.91
Pdlim7Q3TJD7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Timm23-208ENSMUST00000226683 750 ntBASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim7Q3TJD7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Gm15375-201ENSMUST00000119510 849 ntBASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.73■□□□□ 0.91
Pdlim7Q3TJD7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Gm37292-201ENSMUST00000192062 758 ntBASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim7Q3TJD7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdlim7Q3TJD7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Pdlim7Q3TJD7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms