Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Fst-202ENSMUST00000223640 2612 ntBASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Gm13534-201ENSMUST00000121169 513 ntBASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cul4aQ3TCH7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cul4aQ3TCH7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Cul4aQ3TCH7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cul4aQ3TCH7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cul4aQ3TCH7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cul4aQ3TCH7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cul4aQ3TCH7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cul4aQ3TCH7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cul4aQ3TCH7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.33■□□□□ 0.68
Cul4aQ3TCH7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cul4aQ3TCH7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cul4aQ3TCH7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cul4aQ3TCH7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cul4aQ3TCH7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cul4aQ3TCH7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cul4aQ3TCH7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.31■□□□□ 0.68
Cul4aQ3TCH7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cul4aQ3TCH7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cul4aQ3TCH7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cul4aQ3TCH7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cul4aQ3TCH7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cul4aQ3TCH7 Tgds-204ENSMUST00000228543 1594 ntBASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Reep4-203ENSMUST00000226563 1444 ntBASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cul4aQ3TCH7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms