Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm43017-201ENSMUST00000198296 752 ntBASIC17.74■□□□□ 0.43
Ptchd3Q0EEE2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.74■□□□□ 0.43
Ptchd3Q0EEE2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptchd3Q0EEE2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ptchd3Q0EEE2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ptchd3Q0EEE2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptchd3Q0EEE2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ptchd3Q0EEE2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ptchd3Q0EEE2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ptchd3Q0EEE2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Gm11421-201ENSMUST00000122124 294 ntBASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ptchd3Q0EEE2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ptchd3Q0EEE2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Ptchd3Q0EEE2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Gm40848-201ENSMUST00000221998 324 ntBASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ptchd3Q0EEE2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ptchd3Q0EEE2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms