Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.12■□□□□ 0.33
Emx1Q04742 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.11■□□□□ 0.33
Emx1Q04742 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.11■□□□□ 0.33
Emx1Q04742 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.11■□□□□ 0.33
Emx1Q04742 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.11■□□□□ 0.33
Emx1Q04742 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.11■□□□□ 0.33
Emx1Q04742 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Emx1Q04742 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.11■□□□□ 0.33
Emx1Q04742 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Emx1Q04742 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.11■□□□□ 0.33
Emx1Q04742 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Emx1Q04742 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Emx1Q04742 Gm42569-201ENSMUST00000200539 472 ntBASIC17.1■□□□□ 0.33
Emx1Q04742 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Emx1Q04742 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.1■□□□□ 0.33
Emx1Q04742 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Emx1Q04742 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.09■□□□□ 0.33
Emx1Q04742 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.09■□□□□ 0.33
Emx1Q04742 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.09■□□□□ 0.33
Emx1Q04742 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.09■□□□□ 0.33
Emx1Q04742 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Emx1Q04742 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Emx1Q04742 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Emx1Q04742 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Emx1Q04742 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Emx1Q04742 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Emx1Q04742 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Emx1Q04742 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Emx1Q04742 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Emx1Q04742 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Emx1Q04742 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.08■□□□□ 0.32
Emx1Q04742 Gm27405-201ENSMUST00000184201 112 ntBASIC17.08■□□□□ 0.32
Emx1Q04742 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.08■□□□□ 0.32
Emx1Q04742 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Emx1Q04742 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Emx1Q04742 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Emx1Q04742 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.07■□□□□ 0.32
Emx1Q04742 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.07■□□□□ 0.32
Emx1Q04742 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Smad6-203ENSMUST00000179458 273 ntBASIC17.07■□□□□ 0.32
Emx1Q04742 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.07■□□□□ 0.32
Emx1Q04742 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.07■□□□□ 0.32
Emx1Q04742 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.07■□□□□ 0.32
Emx1Q04742 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.07■□□□□ 0.32
Emx1Q04742 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Emx1Q04742 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Emx1Q04742 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Emx1Q04742 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Emx1Q04742 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.06■□□□□ 0.32
Emx1Q04742 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Emx1Q04742 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Emx1Q04742 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Emx1Q04742 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Emx1Q04742 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms