Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
PrkdcP97313 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Gm6623-201ENSMUST00000173570 544 ntBASIC12.74□□□□□ -0.37
PrkdcP97313 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.74□□□□□ -0.37
PrkdcP97313 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.74□□□□□ -0.37
PrkdcP97313 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.74□□□□□ -0.37
PrkdcP97313 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PrkdcP97313 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PrkdcP97313 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC12.74□□□□□ -0.37
PrkdcP97313 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkdcP97313 Mir3081-201ENSMUST00000175305 84 ntBASIC12.73□□□□□ -0.37
PrkdcP97313 Gm2274-201ENSMUST00000184539 609 ntBASIC12.73□□□□□ -0.37
PrkdcP97313 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PrkdcP97313 Gm6443-201ENSMUST00000203599 874 ntBASIC12.73□□□□□ -0.37
PrkdcP97313 Zfp783-201ENSMUST00000095946 670 ntBASIC12.73□□□□□ -0.37
PrkdcP97313 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkdcP97313 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.73□□□□□ -0.37
PrkdcP97313 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.73□□□□□ -0.37
PrkdcP97313 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PrkdcP97313 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
PrkdcP97313 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PrkdcP97313 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.72□□□□□ -0.37
PrkdcP97313 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.72□□□□□ -0.37
PrkdcP97313 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.72□□□□□ -0.37
PrkdcP97313 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.72□□□□□ -0.37
PrkdcP97313 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.72□□□□□ -0.37
PrkdcP97313 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC12.72□□□□□ -0.37
PrkdcP97313 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PrkdcP97313 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC12.72□□□□□ -0.37
PrkdcP97313 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrkdcP97313 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrkdcP97313 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
PrkdcP97313 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
PrkdcP97313 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
PrkdcP97313 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
PrkdcP97313 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PrkdcP97313 Gm18115-201ENSMUST00000221209 621 ntBASIC12.71□□□□□ -0.37
PrkdcP97313 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
PrkdcP97313 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.71□□□□□ -0.37
PrkdcP97313 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
PrkdcP97313 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrkdcP97313 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrkdcP97313 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.71□□□□□ -0.37
PrkdcP97313 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.71□□□□□ -0.37
PrkdcP97313 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PrkdcP97313 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrkdcP97313 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrkdcP97313 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrkdcP97313 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PrkdcP97313 Gm18958-201ENSMUST00000174258 762 ntBASIC12.71□□□□□ -0.38
PrkdcP97313 Gm38027-201ENSMUST00000192315 235 ntBASIC12.71□□□□□ -0.38
PrkdcP97313 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.71□□□□□ -0.38
PrkdcP97313 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
PrkdcP97313 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
PrkdcP97313 Gm7791-201ENSMUST00000219066 539 ntBASIC12.7□□□□□ -0.38
PrkdcP97313 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.7□□□□□ -0.38
PrkdcP97313 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.7□□□□□ -0.38
PrkdcP97313 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
PrkdcP97313 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms