Protein–RNA interactions for Protein: P83917

Cbx1, Chromobox protein homolog 1, mousemouse

Known RBP Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1P83917 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cbx1P83917 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cbx1P83917 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cbx1P83917 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cbx1P83917 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cbx1P83917 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cbx1P83917 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx1P83917 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx1P83917 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx1P83917 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx1P83917 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cbx1P83917 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx1P83917 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cbx1P83917 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cbx1P83917 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cbx1P83917 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.63■□□□□ 0.73
Cbx1P83917 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cbx1P83917 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx1P83917 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx1P83917 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx1P83917 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
Cbx1P83917 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx1P83917 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx1P83917 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx1P83917 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.62■□□□□ 0.73
Cbx1P83917 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx1P83917 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Cbx1P83917 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cbx1P83917 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cbx1P83917 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cbx1P83917 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cbx1P83917 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.6■□□□□ 0.73
Cbx1P83917 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cbx1P83917 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cbx1P83917 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.6■□□□□ 0.73
Cbx1P83917 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 Haglr-201ENSMUST00000100000 2085 ntBASIC19.59■□□□□ 0.73
Cbx1P83917 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cbx1P83917 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cbx1P83917 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cbx1P83917 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cbx1P83917 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cbx1P83917 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.58■□□□□ 0.73
Cbx1P83917 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Cbx1P83917 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cbx1P83917 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Cbx1P83917 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx1P83917 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx1P83917 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx1P83917 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx1P83917 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx1P83917 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cbx1P83917 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms