Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pfn1P62962 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
Pfn1P62962 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pfn1P62962 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pfn1P62962 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pfn1P62962 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfn1P62962 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfn1P62962 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.27□□□□□ -0.12
Pfn1P62962 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pfn1P62962 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfn1P62962 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfn1P62962 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfn1P62962 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pfn1P62962 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfn1P62962 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfn1P62962 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfn1P62962 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfn1P62962 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pfn1P62962 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Pfn1P62962 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pfn1P62962 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfn1P62962 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.26□□□□□ -0.13
Pfn1P62962 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.26□□□□□ -0.13
Pfn1P62962 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.26□□□□□ -0.13
Pfn1P62962 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.26□□□□□ -0.13
Pfn1P62962 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Gm15820-201ENSMUST00000201566 728 ntBASIC14.26□□□□□ -0.13
Pfn1P62962 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.26□□□□□ -0.13
Pfn1P62962 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfn1P62962 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.25□□□□□ -0.13
Pfn1P62962 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.25□□□□□ -0.13
Pfn1P62962 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pfn1P62962 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pfn1P62962 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pfn1P62962 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfn1P62962 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.25□□□□□ -0.13
Pfn1P62962 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.25□□□□□ -0.13
Pfn1P62962 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.24□□□□□ -0.13
Pfn1P62962 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pfn1P62962 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Gm8969-201ENSMUST00000199694 526 ntBASIC14.24□□□□□ -0.13
Pfn1P62962 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.24□□□□□ -0.13
Pfn1P62962 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Pfn1P62962 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pfn1P62962 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pfn1P62962 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms