Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Sec61a1P61620 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sec61a1P61620 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Sec61a1P61620 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.17■□□□□ 0.18
Sec61a1P61620 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sec61a1P61620 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.17■□□□□ 0.18
Sec61a1P61620 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.17■□□□□ 0.18
Sec61a1P61620 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.16■□□□□ 0.18
Sec61a1P61620 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.16■□□□□ 0.18
Sec61a1P61620 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.16■□□□□ 0.18
Sec61a1P61620 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Gm10493-201ENSMUST00000097270 612 ntBASIC16.16■□□□□ 0.18
Sec61a1P61620 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sec61a1P61620 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Sec61a1P61620 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.16■□□□□ 0.18
Sec61a1P61620 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sec61a1P61620 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sec61a1P61620 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sec61a1P61620 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sec61a1P61620 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.15■□□□□ 0.18
Sec61a1P61620 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.15■□□□□ 0.18
Sec61a1P61620 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.15■□□□□ 0.18
Sec61a1P61620 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.15■□□□□ 0.18
Sec61a1P61620 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.15■□□□□ 0.18
Sec61a1P61620 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.15■□□□□ 0.18
Sec61a1P61620 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.15■□□□□ 0.18
Sec61a1P61620 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.15■□□□□ 0.18
Sec61a1P61620 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sec61a1P61620 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.14■□□□□ 0.17
Sec61a1P61620 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.14■□□□□ 0.17
Sec61a1P61620 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.14■□□□□ 0.17
Sec61a1P61620 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Sec61a1P61620 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.14■□□□□ 0.17
Sec61a1P61620 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sec61a1P61620 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sec61a1P61620 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Sec61a1P61620 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sec61a1P61620 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a1P61620 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a1P61620 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a1P61620 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a1P61620 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.13■□□□□ 0.17
Sec61a1P61620 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sec61a1P61620 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.13■□□□□ 0.17
Sec61a1P61620 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.13■□□□□ 0.17
Sec61a1P61620 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a1P61620 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sec61a1P61620 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a1P61620 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.12■□□□□ 0.17
Sec61a1P61620 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sec61a1P61620 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.12■□□□□ 0.17
Sec61a1P61620 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a1P61620 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a1P61620 Fst-202ENSMUST00000223640 2612 ntBASIC16.12■□□□□ 0.17
Sec61a1P61620 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a1P61620 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a1P61620 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a1P61620 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a1P61620 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms