Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.78■□□□□ 0.6
Tubgcp3P58854 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp3P58854 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp3P58854 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp3P58854 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp3P58854 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.78■□□□□ 0.6
Tubgcp3P58854 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp3P58854 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp3P58854 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tubgcp3P58854 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp3P58854 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp3P58854 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubgcp3P58854 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tubgcp3P58854 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tubgcp3P58854 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Gm5874-201ENSMUST00000096101 508 ntBASIC18.76■□□□□ 0.59
Tubgcp3P58854 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubgcp3P58854 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tubgcp3P58854 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.75■□□□□ 0.59
Tubgcp3P58854 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.75■□□□□ 0.59
Tubgcp3P58854 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubgcp3P58854 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Gm42642-201ENSMUST00000200683 355 ntBASIC18.75■□□□□ 0.59
Tubgcp3P58854 Gm10033-202ENSMUST00000211874 928 ntBASIC18.75■□□□□ 0.59
Tubgcp3P58854 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.75■□□□□ 0.59
Tubgcp3P58854 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tubgcp3P58854 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubgcp3P58854 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tubgcp3P58854 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubgcp3P58854 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubgcp3P58854 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.74■□□□□ 0.59
Tubgcp3P58854 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.74■□□□□ 0.59
Tubgcp3P58854 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.74■□□□□ 0.59
Tubgcp3P58854 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubgcp3P58854 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tubgcp3P58854 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Gm18671-201ENSMUST00000214826 683 ntBASIC18.73■□□□□ 0.59
Tubgcp3P58854 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Tubgcp3P58854 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.72■□□□□ 0.59
Tubgcp3P58854 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.72■□□□□ 0.59
Tubgcp3P58854 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tubgcp3P58854 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tubgcp3P58854 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.71■□□□□ 0.59
Tubgcp3P58854 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tubgcp3P58854 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms