Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.87□□□□□ -0.03
Sssca1P56873 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.87□□□□□ -0.03
Sssca1P56873 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.87□□□□□ -0.03
Sssca1P56873 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sssca1P56873 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.86□□□□□ -0.03
Sssca1P56873 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.86□□□□□ -0.03
Sssca1P56873 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sssca1P56873 Gm11421-201ENSMUST00000122124 294 ntBASIC14.86□□□□□ -0.03
Sssca1P56873 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sssca1P56873 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.86□□□□□ -0.03
Sssca1P56873 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.86□□□□□ -0.03
Sssca1P56873 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sssca1P56873 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.85□□□□□ -0.03
Sssca1P56873 Gm12251-201ENSMUST00000117893 792 ntBASIC14.85□□□□□ -0.03
Sssca1P56873 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sssca1P56873 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sssca1P56873 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.85□□□□□ -0.03
Sssca1P56873 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Sssca1P56873 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Sssca1P56873 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sssca1P56873 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sssca1P56873 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sssca1P56873 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.84□□□□□ -0.03
Sssca1P56873 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sssca1P56873 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.84□□□□□ -0.03
Sssca1P56873 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sssca1P56873 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sssca1P56873 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sssca1P56873 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sssca1P56873 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.83□□□□□ -0.03
Sssca1P56873 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Sssca1P56873 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sssca1P56873 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Sssca1P56873 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Sssca1P56873 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.83□□□□□ -0.04
Sssca1P56873 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sssca1P56873 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sssca1P56873 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.83□□□□□ -0.04
Sssca1P56873 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sssca1P56873 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.82□□□□□ -0.04
Sssca1P56873 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms