Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.41■□□□□ 0.54
Lim2P56563 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.41■□□□□ 0.54
Lim2P56563 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Lim2P56563 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lim2P56563 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lim2P56563 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lim2P56563 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Lim2P56563 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lim2P56563 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.4■□□□□ 0.54
Lim2P56563 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lim2P56563 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.4■□□□□ 0.54
Lim2P56563 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lim2P56563 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lim2P56563 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lim2P56563 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lim2P56563 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lim2P56563 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lim2P56563 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lim2P56563 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Lim2P56563 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lim2P56563 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Lim2P56563 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Lim2P56563 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Lim2P56563 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lim2P56563 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lim2P56563 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.38■□□□□ 0.53
Lim2P56563 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.38■□□□□ 0.53
Lim2P56563 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lim2P56563 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lim2P56563 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lim2P56563 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lim2P56563 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lim2P56563 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lim2P56563 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lim2P56563 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lim2P56563 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lim2P56563 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lim2P56563 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.36■□□□□ 0.53
Lim2P56563 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.36■□□□□ 0.53
Lim2P56563 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.36■□□□□ 0.53
Lim2P56563 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.36■□□□□ 0.53
Lim2P56563 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.36■□□□□ 0.53
Lim2P56563 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lim2P56563 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.36■□□□□ 0.53
Lim2P56563 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Lim2P56563 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.36■□□□□ 0.53
Lim2P56563 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lim2P56563 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lim2P56563 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.35■□□□□ 0.53
Lim2P56563 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.35■□□□□ 0.53
Lim2P56563 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.35■□□□□ 0.53
Lim2P56563 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lim2P56563 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.35■□□□□ 0.53
Lim2P56563 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lim2P56563 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.34■□□□□ 0.53
Lim2P56563 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Lim2P56563 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lim2P56563 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Lim2P56563 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms