Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rrp1P56183 Fst-202ENSMUST00000223640 2612 ntBASIC20.74■□□□□ 0.91
Rrp1P56183 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrp1P56183 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.73■□□□□ 0.91
Rrp1P56183 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.73■□□□□ 0.91
Rrp1P56183 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Rrp1P56183 Gm6139-201ENSMUST00000079261 882 ntBASIC20.73■□□□□ 0.91
Rrp1P56183 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrp1P56183 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.72■□□□□ 0.91
Rrp1P56183 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rrp1P56183 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.72■□□□□ 0.91
Rrp1P56183 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.72■□□□□ 0.91
Rrp1P56183 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrp1P56183 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.71■□□□□ 0.91
Rrp1P56183 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.71■□□□□ 0.91
Rrp1P56183 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Rrp1P56183 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rrp1P56183 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrp1P56183 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.71■□□□□ 0.91
Rrp1P56183 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
Rrp1P56183 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.7■□□□□ 0.9
Rrp1P56183 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Rrp1P56183 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp1P56183 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrp1P56183 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.69■□□□□ 0.9
Rrp1P56183 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrp1P56183 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.69■□□□□ 0.9
Rrp1P56183 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrp1P56183 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rrp1P56183 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrp1P56183 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrp1P56183 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.68■□□□□ 0.9
Rrp1P56183 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrp1P56183 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.68■□□□□ 0.9
Rrp1P56183 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.68■□□□□ 0.9
Rrp1P56183 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rrp1P56183 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.68■□□□□ 0.9
Rrp1P56183 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.68■□□□□ 0.9
Rrp1P56183 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrp1P56183 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.68■□□□□ 0.9
Rrp1P56183 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rrp1P56183 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrp1P56183 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Rrp1P56183 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrp1P56183 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp1P56183 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp1P56183 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.67■□□□□ 0.9
Rrp1P56183 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp1P56183 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.67■□□□□ 0.9
Rrp1P56183 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rrp1P56183 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp1P56183 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp1P56183 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms