Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdh11P55288 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdh11P55288 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.74■□□□□ 0.27
Cdh11P55288 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.74■□□□□ 0.27
Cdh11P55288 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.74■□□□□ 0.27
Cdh11P55288 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdh11P55288 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdh11P55288 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh11P55288 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh11P55288 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cdh11P55288 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh11P55288 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh11P55288 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdh11P55288 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdh11P55288 Gm29257-201ENSMUST00000186115 639 ntBASIC16.73■□□□□ 0.27
Cdh11P55288 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh11P55288 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdh11P55288 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh11P55288 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh11P55288 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Cdh11P55288 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh11P55288 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdh11P55288 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdh11P55288 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdh11P55288 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.72■□□□□ 0.27
Cdh11P55288 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Gm27801-201ENSMUST00000184174 223 ntBASIC16.72■□□□□ 0.27
Cdh11P55288 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdh11P55288 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Cdh11P55288 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cdh11P55288 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdh11P55288 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh11P55288 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cdh11P55288 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Cdh11P55288 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh11P55288 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh11P55288 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh11P55288 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh11P55288 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh11P55288 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh11P55288 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh11P55288 Gm10849-201ENSMUST00000100397 618 ntBASIC16.71■□□□□ 0.27
Cdh11P55288 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.71■□□□□ 0.27
Cdh11P55288 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh11P55288 AV356131-201ENSMUST00000206201 750 ntBASIC16.71■□□□□ 0.27
Cdh11P55288 Gm10033-202ENSMUST00000211874 928 ntBASIC16.71■□□□□ 0.27
Cdh11P55288 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh11P55288 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.71■□□□□ 0.27
Cdh11P55288 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cdh11P55288 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Cdh11P55288 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh11P55288 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdh11P55288 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdh11P55288 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.7■□□□□ 0.26
Cdh11P55288 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cdh11P55288 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.7■□□□□ 0.26
Cdh11P55288 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.7■□□□□ 0.26
Cdh11P55288 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cdh11P55288 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cdh11P55288 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Cdh11P55288 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh11P55288 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh11P55288 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.69■□□□□ 0.26
Cdh11P55288 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh11P55288 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms