Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ddx6P54823 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx6P54823 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ddx6P54823 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx6P54823 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 Mtag2-201ENSMUST00000058665 714 ntBASIC18.73■□□□□ 0.59
Ddx6P54823 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx6P54823 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx6P54823 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx6P54823 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx6P54823 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx6P54823 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx6P54823 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.72■□□□□ 0.59
Ddx6P54823 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx6P54823 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx6P54823 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ddx6P54823 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx6P54823 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ddx6P54823 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx6P54823 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx6P54823 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx6P54823 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx6P54823 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx6P54823 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ddx6P54823 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx6P54823 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ddx6P54823 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.71■□□□□ 0.59
Ddx6P54823 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.71■□□□□ 0.59
Ddx6P54823 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx6P54823 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx6P54823 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ddx6P54823 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ddx6P54823 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx6P54823 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx6P54823 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx6P54823 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx6P54823 Gm15375-201ENSMUST00000119510 849 ntBASIC18.7■□□□□ 0.58
Ddx6P54823 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx6P54823 Gm37055-201ENSMUST00000191866 133 ntBASIC18.7■□□□□ 0.58
Ddx6P54823 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.7■□□□□ 0.58
Ddx6P54823 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx6P54823 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Ddx6P54823 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx6P54823 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx6P54823 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx6P54823 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx6P54823 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.69■□□□□ 0.58
Ddx6P54823 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx6P54823 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx6P54823 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ddx6P54823 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.69■□□□□ 0.58
Ddx6P54823 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Ddx6P54823 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx6P54823 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ddx6P54823 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.68■□□□□ 0.58
Ddx6P54823 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ddx6P54823 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx6P54823 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ddx6P54823 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ddx6P54823 Notumos-201ENSMUST00000151998 2659 ntBASIC18.68■□□□□ 0.58
Ddx6P54823 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx6P54823 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx6P54823 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx6P54823 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.67■□□□□ 0.58
Ddx6P54823 Mir6349-201ENSMUST00000184059 97 ntBASIC18.67■□□□□ 0.58
Ddx6P54823 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.67■□□□□ 0.58
Ddx6P54823 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx6P54823 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx6P54823 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx6P54823 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx6P54823 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ddx6P54823 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ddx6P54823 Gm18025-201ENSMUST00000221733 862 ntBASIC18.66■□□□□ 0.58
Ddx6P54823 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx6P54823 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ddx6P54823 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx6P54823 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx6P54823 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.66■□□□□ 0.58
Ddx6P54823 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ddx6P54823 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms