Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Gm27011-201ENSMUST00000182352 972 ntBASIC18.71■□□□□ 0.59
Lhx3P50481 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Lhx3P50481 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx3P50481 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lhx3P50481 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx3P50481 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.7■□□□□ 0.58
Lhx3P50481 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx3P50481 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx3P50481 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lhx3P50481 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lhx3P50481 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx3P50481 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.7■□□□□ 0.58
Lhx3P50481 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx3P50481 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.7■□□□□ 0.58
Lhx3P50481 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx3P50481 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx3P50481 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx3P50481 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.69■□□□□ 0.58
Lhx3P50481 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.69■□□□□ 0.58
Lhx3P50481 Gm2399-201ENSMUST00000104944 225 ntBASIC18.69■□□□□ 0.58
Lhx3P50481 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.69■□□□□ 0.58
Lhx3P50481 Gm12896-201ENSMUST00000118430 226 ntBASIC18.69■□□□□ 0.58
Lhx3P50481 Gm10653-202ENSMUST00000139570 835 ntBASIC18.69■□□□□ 0.58
Lhx3P50481 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.69■□□□□ 0.58
Lhx3P50481 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.69■□□□□ 0.58
Lhx3P50481 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx3P50481 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx3P50481 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.69■□□□□ 0.58
Lhx3P50481 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx3P50481 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx3P50481 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx3P50481 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.69■□□□□ 0.58
Lhx3P50481 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx3P50481 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx3P50481 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Lhx3P50481 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx3P50481 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lhx3P50481 Dio3-201ENSMUST00000097228 1449 ntBASIC18.68■□□□□ 0.58
Lhx3P50481 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx3P50481 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx3P50481 Gm2559-201ENSMUST00000201323 363 ntBASIC18.68■□□□□ 0.58
Lhx3P50481 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.68■□□□□ 0.58
Lhx3P50481 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx3P50481 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx3P50481 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.67■□□□□ 0.58
Lhx3P50481 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx3P50481 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx3P50481 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx3P50481 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.67■□□□□ 0.58
Lhx3P50481 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx3P50481 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.67■□□□□ 0.58
Lhx3P50481 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx3P50481 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.67■□□□□ 0.58
Lhx3P50481 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.66■□□□□ 0.58
Lhx3P50481 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lhx3P50481 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.66■□□□□ 0.58
Lhx3P50481 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Gm27275-201ENSMUST00000184318 272 ntBASIC18.66■□□□□ 0.58
Lhx3P50481 Gm37856-201ENSMUST00000191634 999 ntBASIC18.66■□□□□ 0.58
Lhx3P50481 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.66■□□□□ 0.58
Lhx3P50481 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx3P50481 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lhx3P50481 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.66■□□□□ 0.58
Lhx3P50481 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lhx3P50481 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.65■□□□□ 0.58
Lhx3P50481 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lhx3P50481 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lhx3P50481 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms