Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prox1P48437 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prox1P48437 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.62■□□□□ 0.41
Prox1P48437 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prox1P48437 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prox1P48437 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Prox1P48437 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.62■□□□□ 0.41
Prox1P48437 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.62■□□□□ 0.41
Prox1P48437 Gm21956-201ENSMUST00000179946 522 ntBASIC17.62■□□□□ 0.41
Prox1P48437 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.62■□□□□ 0.41
Prox1P48437 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.62■□□□□ 0.41
Prox1P48437 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prox1P48437 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prox1P48437 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prox1P48437 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prox1P48437 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prox1P48437 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Prox1P48437 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prox1P48437 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.62■□□□□ 0.41
Prox1P48437 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prox1P48437 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prox1P48437 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.61■□□□□ 0.41
Prox1P48437 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.61■□□□□ 0.41
Prox1P48437 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prox1P48437 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prox1P48437 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Gm12821-201ENSMUST00000120022 600 ntBASIC17.6■□□□□ 0.41
Prox1P48437 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.6■□□□□ 0.41
Prox1P48437 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.6■□□□□ 0.41
Prox1P48437 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prox1P48437 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.59■□□□□ 0.41
Prox1P48437 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Prox1P48437 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.59■□□□□ 0.41
Prox1P48437 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.59■□□□□ 0.41
Prox1P48437 Spcs1-204ENSMUST00000226782 949 ntBASIC17.59■□□□□ 0.41
Prox1P48437 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Prox1P48437 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prox1P48437 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Prox1P48437 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.58■□□□□ 0.41
Prox1P48437 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prox1P48437 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prox1P48437 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Prox1P48437 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.58■□□□□ 0.4
Prox1P48437 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.58■□□□□ 0.4
Prox1P48437 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prox1P48437 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.57■□□□□ 0.4
Prox1P48437 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prox1P48437 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prox1P48437 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.57■□□□□ 0.4
Prox1P48437 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Prox1P48437 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prox1P48437 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prox1P48437 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.57■□□□□ 0.4
Prox1P48437 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Prox1P48437 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.57■□□□□ 0.4
Prox1P48437 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms