Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rfx2P48379 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
Rfx2P48379 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rfx2P48379 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.25■□□□□ 0.67
Rfx2P48379 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.25■□□□□ 0.67
Rfx2P48379 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx2P48379 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.25■□□□□ 0.67
Rfx2P48379 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rfx2P48379 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Rfx2P48379 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx2P48379 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx2P48379 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rfx2P48379 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfx2P48379 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfx2P48379 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx2P48379 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx2P48379 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx2P48379 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.23■□□□□ 0.67
Rfx2P48379 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rfx2P48379 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.23■□□□□ 0.67
Rfx2P48379 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rfx2P48379 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx2P48379 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx2P48379 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx2P48379 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx2P48379 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx2P48379 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.22■□□□□ 0.67
Rfx2P48379 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx2P48379 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx2P48379 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx2P48379 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx2P48379 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rfx2P48379 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx2P48379 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.21■□□□□ 0.67
Rfx2P48379 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx2P48379 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx2P48379 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx2P48379 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.21■□□□□ 0.67
Rfx2P48379 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.21■□□□□ 0.67
Rfx2P48379 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.21■□□□□ 0.67
Rfx2P48379 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rfx2P48379 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfx2P48379 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rfx2P48379 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx2P48379 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx2P48379 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx2P48379 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.2■□□□□ 0.66
Rfx2P48379 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Rfx2P48379 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Gm13168-201ENSMUST00000121771 632 ntBASIC19.2■□□□□ 0.66
Rfx2P48379 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.2■□□□□ 0.66
Rfx2P48379 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx2P48379 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx2P48379 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rfx2P48379 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx2P48379 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx2P48379 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.19■□□□□ 0.66
Rfx2P48379 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.19■□□□□ 0.66
Rfx2P48379 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx2P48379 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx2P48379 Gm37856-201ENSMUST00000191634 999 ntBASIC19.19■□□□□ 0.66
Rfx2P48379 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx2P48379 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx2P48379 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms